Publications

July 2020

Jonathan Jones Group

Duxbury Z, Wang S, MacKenzie CI, Tenthorey JL, Zhang X, Huh SU, Hu L, Hill L, Ngou PM, Ding P, Chen J, Ma Y, Guo H, Castel B, Moschou PN, Bernoux M, Dodds PN, Vance RE, Jones JDG (2020)

Induced proximity of a TIR signaling domain on a plant-mammalian NLR chimera activates defense in plants. Proc Natl Acad Sci U S A. 2020 Jul 24:202001185. doi: 10.1073/pnas.2001185117.

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July 2020

Cyril Zipfel Group

Gronnier J, Franck CM, Stegmann M, DeFalco TA, Cifuentes AA, Dünser K, Lin W, Yang Z, Kleine-Vehn J, Ringli C, Zipfel C (2020)

FERONIA regulates FLS2 plasma membrane nanoscale dynamics to modulate plant immune signaling. bioRxiv preprint July 22, 2020 doi: https://doi.org/10.1101/2020.07.20.212233

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July 2020

Sophien Kamoun Group

Latorre SM, Reyes-Avila CS, Malmgren A, Win J, Kamoun S, Burbano HA (2020)

Differential loss of effector genes in three recently expanded pandemic clonal lineages of the rice blast fungus. BMC Biol. 2020 Jul 16;18(1):88. doi: 10.1186/s12915-020-00818-z.

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July 2020

Sophien Kamoun Group

Kourelis J, Sophien Kamoun S (2020)

RefPlantNLR: a comprehensive collection of experimentally validated plant NLRs. bioRxiv preprint July 09, 2020 doi: https://doi.org/10.1101/2020.07.08.193961

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July 2020

Bioinformatics

Kristianingsih R, MacLean D (2020)

Accurate plant pathogen effector protein classification ab initio with deepredeff, an ensemble of convolutional neural networks. bioRxiv preprint July 09, 2020 doi: https://doi.org/10.1101/2020.07.08.193250

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July 2020

Guo Y, Dupont PY, Mesarich CH, Yang B, McDougal RL, Panda P, Dijkwel P, Studholme DJ, Sambles C, Win J, Wang Y, Williams NM, Bradshaw RE (2020)

Functional Analysis of RXLR Effectors From the New Zealand Kauri Dieback Pathogen Phytophthora agathidicida. Mol Plant Pathol. 2020 Jul 8. doi: 10.1111/mpp.12967.

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July 2020

Sophien Kamoun Group, Tissue Culture & Transformation

Paulus JK, Kourelis J, Ramasubramanian S, Homma F, Godson A, Hörger AC, Hong TN, Krahn D, Carballo LO, Wang S, Win J, Smoker M, Kamoun S, Dong S, van der Hoorn RAL (2020)

Extracellular proteolytic cascade in tomato activates immune protease Rcr3. PNAS first published July 2, 2020 https://doi.org/10.1073/pnas.1921101117

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June 2020

Sophien Kamoun Group

Lin X, Wang S, de Rond L, Bertolin N, Wouters RHM, Wouters D, Domazakis E, Bitew MK, Win J, Dong S, Visser RGF, Birch P, Kamoun S, Vleeshouwers VGAA (2020)

Divergent Evolution of PcF/SCR74 Effectors in Oomycetes Is Associated With Distinct Recognition Patterns in Solanaceous Plants. mBio. 2020 Jun 30;11(3):e00947-20. doi: 10.1128/mBio.00947-20.

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June 2020

Cyril Zipfel Group

Abarca A, Franck CM, Zipfel C (2020)

Family-wide evaluation of RALF peptides in Arabidopsis thaliana. bioRxiv preprint June 27, 2020 doi: https://doi.org/10.1101/2020.06.26.174169

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June 2020

Bioinformatics, Jonathan Jones Group

Ding P, Sakai T, Shrestha RK, Perez NM, Guo W, Ngou BPM, He S, Liu C, Feng X, Zhang R, Vandepoele K, MacLean D, Jones JDG (2020)

Chromatin accessibility landscapes activated by cell surface and intracellular immune receptors. bioRxiv preprint June 18, 2020 doi: https://doi.org/10.1101/2020.06.17.157040

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