Publications

February 2002

Jonathan Jones Group

Jones J D.G (2002)

From physics and chemistry to plant biology. Plant Physiol. 2002 Feb;128(2):332-3.

January 2005

Jonathan Jones Group

Rowland O, Ludwig AA, Merrick CJ, Baillieul F, Tracy FE, Durrant WE, Fritz-Laylin L, Nekrasov V, Sjolander K, Yoshioka H, Jones JD (2005)

Functional Analysis of Avr9/Cf-9 Rapidly Elicited Genes Identifies a Protein Kinase, ACIK1, That Is Essential for Full Cf-9-Dependent Disease Resistance in Tomato. Plant Cell. 17:295-310.

January 2000

Jonathan Jones Group

Piedras, P., Rivas, S., Droge, S., Hillmer, S., and Jones, J. D. G. (2000)

Functional, c-myc-tagged Cf-9 resistance gene products are plasma membrane localised and glycosylated. The Plant Journal 21, 529-536.

July 2011

Bioinformatics, Jonathan Jones Group

Eric Kemen, Anastasia Gardiner, Torsten Schultz-Larsen, Ariane C Ke- men, Alexi L Balmuth, Alexandre Robert-Seilaniantz, Kate Bailey, Eric Holub, David J Studholme, Dan MacLean, et al. (2011)

Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of arabidopsis thaliana. PLoS Biology, 9(7):e1001094

December 2004

Jonathan Jones Group

Wulff BB, Kruijt M, Collins PL, Thomas CM, Ludwig AA, De Wit PJ, Jones JDG. (2004)

Gene shuffling-generated and natural variants of the tomato resistance gene Cf-9 exhibit different auto-necrosis-inducing activities in Nicotiana species. Plant J. Dec;40(6):942-56.

April 2008

Jonathan Jones Group

Zipfel C, Schwessinger B, Roux, M and Jones JDG (2008)

Genetic analysis of PAMP-triggered immunity in Arabidopsis. In: Lorito, M, Woo, SL and Scala, F (ed). International Society for Molecular Plant-Microbe Interactions, St. Paul, Minnesota. Biology of Plant-Microbe Interactions, 6.

August 2000

Jonathan Jones Group

Dixon, M. S., Golstein, C., Thomas, C. M., van der Biezen, E. A., and Jones, J. D. G. (2000)

Genetic complexity of pathogen perception by plants: The example of Rcr3, a tomato gene required specifically by Cf-2. Proc Nat Acad Sci USA 97, 8807-8813.

January 2004

Jonathan Jones Group

Wulff BBH, Thomas CM, Parniske M and Jones JDG (2004)

Genetic variation at the tomato Cf-4/Cf-9 locus induced by EMS mutagenesis and intra-locus recombination. Genetics . 167: 459-470.

August 2009

Bioinformatics, Jonathan Jones Group, Sophien Kamoun Group

Haas, B.J., Kamoun, S., Zody, M.C., Jiang, R.H.Y., Handsaker, R.E., Cano, L.M., Grabherr, M., Kodira, C.D., Raffaele, S., Torto-Alalibo, T., Bozkurt, T.O., Ah-Fong, A.M.V., Alvarado, L., Anderson, V.L., Armstrong, M.R., Avrova, A., Baxter, L., Beynon, J., Boevink, P.C., Bollmann, S.R., Bos, J.I.B., Bulone, V., Cai, G., Cakir, C., Carrington, J.C., Chawner, M., Conti, L., Costanzo, S., Ewan, R., Fahlgren, N., Fischbach, M.A., Fugelstad, J., Gilroy, E.M., Gnerre, S., Green, P.J., Grenville-Briggs, L.J., Griffith, J., Grunwald, N.J., Horn, K., Horner, N.R., Hu, C.-H., Huitema, E., Jeong, D.-H., Jones, A.M.E., Jones, J.D.G., Jones, R.W., Karlsson, E.K., Kunjeti, S.G., Lamour, K., Liu, Z., Ma, L., MacLean, D., Chibucos, M.C., McDonald, H., McWalters, J., Meijer, H.J.G., Morgan, W., Morris, P.F., Munro, C.A., O'Neill, K., Ospina-Giraldo, M., Pinzon, A., Pritchard, L., Ramsahoye, B., Ren, Q., Restrepo, S., Roy, S., Sadanandom, A., Savidor, A., Schornack, S., Schwartz, D.C., Schumann, U.D., Schwessinger, B., Seyer, L., Sharpe, T., Silvar, C., Song, J., Studholme, D.J., Sykes, S., Thines, M., van de Vondervoort, P.J.I., Phuntumart, V., Wawra, S., Weide, R., Win, J., Young, C., Zhou, S., Fry, W., Meyers, B.C., van West, P., Ristaino, J., Govers, F., Birch, P.R.J., Whisson, S.C., Judelson, H.S., and Nusbaum, C. 2009.

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 461:393-398.

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March 2010

Jonathan Jones Group

Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M. (2010)

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 2010 Jun 3;465(7298):627-31. Epub 2010 Mar 24. PubMed PMID: 20336072.