Publications

October 2013

Bioinformatics, Jonathan Jones Group

Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, Maclean D, Cock PJ, Leggett RM, Bryan GJ, Cardle L, Hein I, Jones JD. (2013)

Resistance gene enrichment sequencing (renseq) enables reannotation of the nb-lrr gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. The Plant Journal, 76(3):530–544

October 2015

Proteomics, Sophien Kamoun Group

Petre B, Lorrain C, Saunders DG, Win J, Sklenar J, Duplessis S, Kamoun S (2015)

Rust fungal effectors mimic host transit peptides to translocate into chloroplasts. Cell Microbiol. 2015 Oct 1. doi: 10.1111/cmi.12530.

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November 2015

Proteomics

Gupta YK, Dagdas YF, Martinez-Rochaa A-L, Kershaw MJ, Littlejohn GR, Rydera LS, Sklenar J, Menke F, Talbot NJ (2015)

Septin-Dependent Assembly of the Exocyst Is Essential for Plant Infection by Magnaporthe oryzae. The Plant Cell doi: http:/​/​dx.​doi.​org/​10.​1105/​tpc.​15.​00552

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October 2012

Bioinformatics, Silke Robatzek Group

Beck, M., Zhou, J., Faulkner, C., MacLean, D. and Robatzek, S. (2012)

Spatio-temporal cellular dynamics of the Arabidopsis flagellin receptor reveal activation status-dependent endosomal sorting. Plant Cell. 24: 4205-4219.

July 2015

Cyril Zipfel Group, Jonathan Jones Group, Silke Robatzek Group, Sophien Kamoun Group, Synthetic Biology, The 2Blades Group

Patron NJ, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farré G, Rogers C, Smith A, Hibberd J, Webb AAR, Locke J, Schornack S, Ajioka J, Baulcombe DC, Zipfel C, Kamoun S, Jones JDG, Kuhn H, Robatzek S, Van Esse HP, Sanders D, Oldroyd G, Martin C, Field R, O'Connor S, Fox S, Wulff B, Miller B, Breakspear A, Radhakrishnan G, Delaux PM, Loqué D, Granell A, Tissier A, Shih P, Brutnell TP, Quick WP, Rischer H, Fraser PD, Aharoni A, Raines C, South PF, Ané JM, Hamberger BR, Langdale J, Stougaard J, Bouwmeester H, Udvardi M, Murray JAH, Ntoukakis V, Schäfer P, Denby K, Edwards KJ, Osbourn A, Haseloff J (2015)

Standards for plant synthetic biology: a common syntax for exchange of DNA parts. New Phytologist 14 Jul 2015 doi: 10.1111/nph.13532

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June 2013

Bioinformatics

Graham J Etherington and Daniel MacLean. (2013)

Svgenes: a library for ren- dering genomic features in scalable vector graphic format. Bioinformatics, 29(15):1890–1892

August 2016

Bioinformatics, Cyril Zipfel Group, Proteomics, Silke Robatzek Group

Couto D, Niebergall R, Liang X, Bücherl CA, Sklenar J, Macho AP, Ntoukakis V, Derbyshire P, Altenbach D, Maclean D, Robatzek S, Uhrig J, Menke F, Zhou JM, Zipfel C (2016)

The Arabidopsis Protein Phosphatase PP2C38 Negatively Regulates the Central Immune Kinase BIK1. PLoS Pathog. 12(8):e1005811. doi: 10.1371/journal.ppat.1005811.

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November 2014

Bioinformatics, Cyril Zipfel Group

Monaghan J, Matschi S, Shorinola O, Rovenich H, Matei A, Segonzac C, Gro Malinovsky F, Rathjen JP, MacLean D, Romeis T, Zipfel C (2014)

The Calcium-Dependent Protein Kinase CPK28 Buffers Plant Immunity and Regulates BIK1 Turnover. Cell Host & Microbe (2014) Volume 16, p605–615. DOI: http://dx.doi.org/10.1016/j.chom.2014.10.007

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December 2011

Bioinformatics

JP Carr, Mathew Lewsey, J Westwood, Heiko Ziebell, Daniel MacLean, A Kleczkowski, M Stevens, and John A Walsh. (2011)

The effects of cucumber mosaic virus 2b protein on methyl jasmonate induced transcriptional re- sponses and plant-aphid interactions in arabidopsis

March 2008

Bioinformatics, Jonathan Jones Group

Harrold A van den Burg, Dimitrios I Tsitsigiannis, Owen Rowland, Jane Lo, Ghanasyam Rallapalli, Daniel MacLean, Frank LW Takken, and Jonathan DG Jones. (2008)

The f-box protein acre189/acif1 regulates cell death and defense responses activated during pathogen recognition in tobacco and tomato. The Plant Cell Online, 20(3):697–719