May 2017

Bioinformatics, Jonathan Jones Group, Proteomics

Wirthmueller L, Asai S, Rallapalli G, Sklenar J, Fabro G, Kim DS, Lintermann R, Jaspers P, Wrzaczek M, Kangasjärvi L, MacLean D, Menke FLH, Banfield MJ, JDG (2017)

An Oomycete Effector Protein Induces Shade Avoidance In Arabidopsis And Attenuates Salicylate Signaling By Binding To Host Proteins Of The RADICAL-INDUCED CELL DEATH1 Family. bioRxiv preprint May 14, 2017 doi: https://doi.org/10.1101/137844

January 2015

Bioinformatics

Aleksic J, Alexa A, Attwood TK, Chue Hong N, Dahlö M, Davey R, Dinkel H, Förstner KU, Grigorov I, Hériché JK, Lahti L, MacLean D, Markie ML, Molloy J, Schneider MV, Scott C, Smith-Unna R, Vieira BM (2015)

An open science peer review oath. [v2; ref status: indexed, http://f1000r.es/4wf] F1000Research 2015, 3:271 (doi: 10.12688/f1000research.5686.2)

December 2017

Sophien Kamoun Group

Fujisaki K, Abe Y, Kanzaki E, Ito K, Utsushi H, Saitoh H, Białas A, Banfield M, Kamoun S, Terauchi R (2017)

An unconventional NOI/RIN4 domain of a rice NLR protein binds host EXO70 protein to confer fungal immunity. bioRxiv preprint Dec 24, 2017 doi: https://doi.org/10.1101/239400

November 2010

Sophien Kamoun Group

Raffaele, S., Win, J., Cano, L.M., Kamoun, S. 2010.

Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans. BMC Genomics, 11:637.

October 2016

Boccara M, Sarazin A, Billoud B, Bulski A, Chapell L, Baulcombe D, Colot V (2016)

Analysis of Small RNA Populations Using Hybridization to DNA Tiling Arrays. Methods Mol Biol. 2017;1456:127-139.

November 2008

Sophien Kamoun Group

Cheung, F., Win, J., Lang, J.M., Hamilton, J., Vuong, H., Leach, J.E., Kamoun, S., Levesque, C.A., Tisserat, N., and Buell, C.R. 2008.

Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. BMC Genomics, 9:542.

September 2010

Sophien Kamoun Group, Tissue Culture & Transformation

Schornack, S., van Damme, M., Bozkurt, T.O., Cano, L.M., Smoker, M., Thines, M., Gaulin, E., Kamoun S., and Huitema, E. 2010.

Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences USA, 107:17421-17426.

July 2014

Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M; International Wheat Genome Sequencing Consortium,, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF, Olsen OA. (2014)

Ancient hybridizations among the ancestral genomes of bread wheat. Science. 2014 Jul 18;345(6194):1250092. doi: 10.1126/science.1250092. PubMed PMID: 25035499.

March 2014

Cyril Zipfel Group, Sophien Kamoun Group

Gro Malinovsky, F., Batoux, M., Schwessinger, B., Youn, J.H., Stransfeld, L., Win, J., Kim, S.K. and Zipfel, C. (2014)

Antagonistic regulation of growth and immunity by the Arabidopsis bHLH transcription factor HBI1. Plant Physiology, in press.

February 2009

Bioinformatics, Jonathan Jones Group

Daniel MacLean, Jonathan DG Jones, and David J Studholme. (2009)

Application of ’next-generation’ sequencing technologies to microbial genetics. Nature Reviews Microbiology, 7(4):287–296