Publications

April 2014

Bioinformatics, Sophien Kamoun Group

Saunders, D., Yoshida, K., Sambles, C., Glover, R., Clavijo, B., Corpas, M., Bunting, D., Dong, S., Clark, M., Swarbreck, D., Ayling, S., Bashton, M., Collin, S., Hosoya, T., Edwards, A., Crossman, L., Etherington, G., Win, J., Cano, L., Studholme, D., Downie, J.A., Caccamo, M., Kamoun, S., and MacLean, D. (2014)

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community. bioRxiv, 5:98.

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April 2014

Sophien Kamoun Group

Yoshida, K., Burbano, H.A., Krause, J., Thines, M., Weigel, D., and Kamoun, S. (2014)

Mining herbaria for plant pathogen genomes: back to the future. PLOS Pathogens, 10:e1004028.

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April 2014

Sophien Kamoun Group

Saunders, D.G., Win, J., Kamoun, S., and Raffaele, S. (2014)

Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes. In “Plant-Pathogen Interactions: Methods and Protocols”, P. Birch, J. Jones, and J. Bos, eds. Methods in Molecular Biology, 1127:29-51.

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April 2014

Sophien Kamoun Group

Lee, H.A., Kim, S.Y., Oh, S.K., Yeom, S.I., Kim, S.B., Kim, M.S., Kamoun, S., and Choi, D. (2014)

Multiple recognition of RXLR effectors is associated with nonhost resistance of pepper against Phytophthora infestans. New Phytologist, in press.

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March 2014

Sophien Kamoun Group

Nemri, A., Saunders, D.G., Anderson, C., Upadhyaya, N.M., Win, J., Lawrence, G., Jones, D., Kamoun, S., Ellis, J., and Dodds, P. (2014)

The genome sequence and effector complement of the flax rust pathogen Melampsora lini. Frontiers in Plant Science, 5:98.

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March 2014

Cyril Zipfel Group, Sophien Kamoun Group

Gro Malinovsky, F., Batoux, M., Schwessinger, B., Youn, J.H., Stransfeld, L., Win, J., Kim, S.K. and Zipfel, C. (2014)

Antagonistic regulation of growth and immunity by the Arabidopsis bHLH transcription factor HBI1. Plant Physiology, in press.

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March 2014

Sophien Kamoun Group

King, S.R.F., McLellan, H., Boevink, P.C., Armstrong, M.R., Bukharova, B., Sukarta, O., Win, J., Kamoun, S., Birch, P.R.J., and Banfield, M.J. (2014)

Phytophthora infestans RXLR effector PexRD2 interacts with host MAPKKKe to suppress plant immune signaling. Plant Cell, in press.

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