Publications

July 2013

Jonathan Jones Group, Sophien Kamoun Group

Xia, S., Cheng, Y.T., Huang, S., Win, J., Soards, A., Jinn, T.L., Jones, J., Kamoun, S., Chen, S., Zhang, Y., Li, X. 2013.

Regulation of transcription of NB-LRR-encoding genes SNC1 and RPP4 via H3K4 tri-methylation. Plant Physiology, 162:1694-1705.

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May 2013

Cyril Zipfel Group, Jonathan Jones Group

Asai S, Ichikawa T, Nomura H, Kobayashi M, Kamiyoshihara Y, Mori H, Kadota Y, Zipfel C, Jones JDG and Yoshioka H (2013)

The variable domain of a plant calcium-dependent protein kinase (CDPK) confers subcellular localization and substrate recognition for NADPH oxidase. JBC, 288(20):14332-14340.

March 2013

Bioinformatics, Jonathan Jones Group

Richard M Leggett, Ricardo H Ramirez-Gonzalez, Walter Verweij, Cintia G Kawashima, Zamin Iqbal, Jonathan DG Jones, Mario Caccamo, and Daniel MacLean. (2013)

Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs. PloS ONE, 8(3):e60058

March 2013

Jonathan Jones Group, Sophien Kamoun Group

Sharma, S., Sharma, S., Hirabuchi, A., Yoshida, K., Fujisaki, K., Ito, A., Uemura, A., Terauchi, R., Kamoun, S., Sohn, K.H., Jones, J.D., and Saitoh, H. 2013.

Deployment of Burkholderia glumae type III secretion system as an efficient tool for translocating pathogen effectors to monocot cells. Plant Journal, 74:701-712.

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December 2012

Jonathan Jones Group

Caillaud MC, Wirthmueller L, Fabro G, Piquerez SJ, Asai S, Ishaque N, Jones JD. (2012)

Mechanisms of Nuclear Suppression of Host Immunity by Effectors from the Arabidopsis Downy Mildew Pathogen Hyaloperonospora arabidopsidis (Hpa). Cold Spring Harb Symp Quant Biol. 2012 Dec 4.

October 2012

Jonathan Jones Group

Sohn KH, Hughes RK, Piquerez SJ, Jones JD, Banfield MJ.

Distinct regions of the Pseudomonas syringae coiled-coil effector AvrRps4 are required for activation of immunity. Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16371-6. doi: 10.1073/pnas.1212332109. Epub 2012 Sep 17

July 2012

Jonathan Jones Group

Sohn KH, Hughes RK, Piquerez SJ, Jones JD, Banfield MJ. (2012)

Draft genome sequence of Pseudomonas syringae pathovar syringae strain FF5, causal agent of stem tip dieback disease on ornamental pear. J Bacteriol. 2012 Jul;194(14):3733-4. doi: 10.1128/JB.00567-12.

July 2012

Jonathan Jones Group

Solé M, Popa C, Mith O, Sohn KH, Jones JD, Deslandes L, Valls M. (2012)

The awr gene family encodes a novel class of Ralstonia solanacearum type III effectors displaying virulence and avirulence activities. Mol Plant Microbe Interact. 2012 Jul;25(7):941-53. doi: 10.1094/MPMI-12-11-0321.

May 2012

Jonathan Jones Group

Kemen E, Jones JD. (2012)

Obligate biotroph parasitism: can we link genomes to lifestyles? Trends Plant Sci. 2012 Aug;17(8):448-57. doi: 10.1016/j.tplants.2012.04.005. Epub 2012 May 19

February 2012

Jonathan Jones Group

Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. (2012)

Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1.