Publications

November 2014

Bioinformatics, Cyril Zipfel Group

Monaghan J, Matschi S, Shorinola O, Rovenich H, Matei A, Segonzac C, Gro Malinovsky F, Rathjen JP, MacLean D, Romeis T, Zipfel C (2014)

The Calcium-Dependent Protein Kinase CPK28 Buffers Plant Immunity and Regulates BIK1 Turnover. Cell Host & Microbe (2014) Volume 16, p605–615. DOI: http://dx.doi.org/10.1016/j.chom.2014.10.007

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November 2014

Jonathan Jones Group, Proteomics, Silke Robatzek Group

Caillaud MC, Wirthmueller L, Sklenar J, Findlay K, Piquerez SJ, Jones AM, Robatzek S, Jones JD, Faulkner C (2014)

The Plasmodesmal Protein PDLP1 Localises to Haustoria-Associated Membranes during Downy Mildew Infection and Regulates Callose Deposition. PLoS Pathog. 2014 Nov 13;10(11):e1004496. doi: 10.1371/journal.ppat.1004496.

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November 2014

Sophien Kamoun Group, Synthetic Biology

Belhaj K, Chaparro-Garcia A, Kamoun S, Patron NJ, Nekrasov V (2015)

Editing plant genomes with CRISPR/Cas9. Current Opinion in Biotechnology Volume 32, April 2015, Pages 76–84

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January 2015

Bioinformatics, Cyril Zipfel Group

Etherington GJ, Monaghan J, Zipfel C, MacLean D (2014)

Mapping mutations in plant genomes with the user-friendly web application CandiSNP. Plant Methods 2014, 10:306. doi:10.1186/s13007-014-0041-7

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January 2015

Bioinformatics

Aleksic J, Alexa A, Attwood TK, Chue Hong N, Dahlö M, Davey R, Dinkel H, Förstner KU, Grigorov I, Hériché JK, Lahti L, MacLean D, Markie ML, Molloy J, Schneider MV, Scott C, Smith-Unna R, Vieira BM (2015)

An open science peer review oath. [v2; ref status: indexed, http://f1000r.es/4wf] F1000Research 2015, 3:271 (doi: 10.12688/f1000research.5686.2)

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February 2015

Proteomics, Sophien Kamoun Group

Petre B, Saunders DG, Sklenar J, Lorrain C, Win J, Duplessis S, Kamoun S (2015)

Candidate effector proteins of the rust pathogen Melampsora larici-populina target diverse plant cell compartments. Mol Plant Microbe Interact. 2015 Feb 4. [Epub ahead of print]

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March 2015

Bioinformatics

Etherington GJ, Ricardo H. Ramirez-Gonzalez RH, MacLean D (2015)

bio-samtools 2: a package for analysis and visualization of sequence and alignment data with SAMtools in Ruby. Bioinformatics (2015) doi: 10.1093/bioinformatics/btv178

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April 2015

Proteomics, Silke Robatzek Group

Heard W, Sklenar J, Tome DF, Robatzek S, Jones AM (2015)

Identification of regulatory and cargo proteins of endosomal and secretory pathways in Arabidopsis thaliana by proteomic dissection. Mol Cell Proteomics. 2015 Apr 21.

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May 2015

Proteomics

Mithoe SC, Menke FL (2015)

Phosphopeptide Immuno-Affinity Enrichment to Enhance Detection of Tyrosine Phosphorylation in Plants. Methods in Molecular Biology Volume 1306, 2015, pp 135-146

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May 2015

Jonathan Jones Group, Proteomics

Sarris PF, Duxbury Z, Huh SU, Yan Ma, Segonzac C, Sklenar J, Derbyshire P, Cevik V, Rallapalli G, Saucet SB, Wirthmueller L, Menke FLH, Sohn KH, Jones JDG

A plant immune receptor detects pathogen effectors that target WRKY transcription factors. Cell Volume 161, Issue 5, p1089–1100

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