Publications

September 2018

Nick Talbot Group

Foster AJ, Martin-Urdiroz M, Yan X, Wright HS, Soanes DM, Talbot NJ (2018)

CRISPR-Cas9 ribonucleoprotein-mediated co-editing and counterselection in the rice blast fungus. Sci Rep. 2018 Sep 25;8(1):14355. doi: 10.1038/s41598-018-32702-w.

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July 2018

Sophien Kamoun Group

Langner T, Kamoun S, Belhaj K (2018)

CRISPR Crops: Plant Genome Editing Toward Disease Resistance. Annu Rev Phytopathol. 2018 Jul 5. doi: 10.1146/annurev-phyto-080417-050158.

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February 2012

Jonathan Jones Group

Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. (2012)

Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1.

October 2013

Bioinformatics, Sophien Kamoun Group

Kosugi, S., Natsume, S., Yoshida, K., MacLean, D., Cano, L., Kamoun, S., and Terauchi, R. 2013.

Coval: Improving alignment quality and variant calling accuracy for next-generation sequencing data. PLOS ONE, 8:e75402.

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September 2014

Jonathan Jones Group

Weßling R, Epple P, Altmann S, He Y, Yang L, Henz SR, McDonald N, Wiley K, Bader KC, Gläßer C, Mukhtar MS, Haigis S, Ghamsari L, Stephens AE, Ecker JR, Vidal M, Jones JD, Mayer KF, Ver Loren van Themaat E, Weigel D, Schulze-Lefert P, Dangl JL, Panstruga R, Braun P. (2014)

Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life. Cell Host & Microbe 16: 364 – 375 (2014) DOI: http://dx.doi.org/10.1016/j.chom.2014.08.004

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November 2019

Baggs EL, Thanki AS, O’Grady R, Schudoma C, Haerty W, Krasileva KV (2019)

Convergent loss of an EDS1/PAD4 signalling pathway in several plant lineages predicts new components of plant immunity and drought response. bioRxiv preprint Nov 30, 2019 doi: https://doi.org/10.1101/572560

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May 2020

Baggs E, Monroe JG, Thanki AS, O'Grady R, Schudoma C, Haerty W, Krasileva KV (2020)

Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Co-evolved Components of Plant Immunity and Drought Response. Plant Cell. 2020 May 14:tpc.00903.2019. doi: 10.1105/tpc.19.00903.

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March 2019

Baggs EL, Thanki AS, O'Grady R, Schudoma C, Haerty W, Krasileva KV (2019)

Convergent gene loss in aquatic plants predicts new components of plant immunity and drought response. bioRxiv preprint Mar 11, 2019 doi: https://doi.org/10.1101/572560

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September 2009

Cyril Zipfel Group, Jonathan Jones Group

Nekrasov V, Li J, Batoux M, Roux M, Lacombe S, Rougon A, Chu ZH, Bittel P, Kiss-Papp M, Chinchilla D, van Esse HP, Jorda L, Schwessinger B, Nicaise V, Thomma BPHJ, Molina A, Jones JDG and Zipfel C (2009)

Control of the pattern recognition receptor EFR by an ER protein complex in plant immunity. EMBO Journal 28: 3428-3438.

April 2020

Cyril Zipfel Group

Noble JA, Liu MCJ, DeFalco TA, Stegmann M, McNamara K, Sullivan B, Dinh KK, Khuu N, Hancock S, Shiu SH, Zipfel C, Beilstein MA, Cheung AY, Palanivelu R (2020)

Conserved Molecular Function and Regulatory Subfunctionalization of the LORELEI Gene Family in Brassicaceae. bioRxiv preprint Apr 29, 2020 doi: https://doi.org/10.1101/2020.04.27.062893

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