Publications

March 2015

Jonathan Jones Group

Saucet SB, Ma Y, Sarris PF, Furzer OJ, Sohn KH, Jones JDG (2015)

Two linked pairs of Arabidopsis TNL resistance genes independently confer recognition of bacterial effector ​AvrRps4. Nature Communications 6, Article number: 6338 doi:10.1038/ncomms7338

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April 2014

Sophien Kamoun Group

Saunders, D.G., Win, J., Kamoun, S., and Raffaele, S. (2014)

Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes. In “Plant-Pathogen Interactions: Methods and Protocols”, P. Birch, J. Jones, and J. Bos, eds. Methods in Molecular Biology, 1127:29-51.

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August 2017

Cyril Zipfel Group

Singh V, Perraki A, Kim SY, Shrivastava S, Lee JH, Zhao Y, Schwessinger B, Oh MH, Marshall-Colon A, Zipfel C, Huber SC (2017)

Tyrosine-610 in the Receptor Kinase BAK1 Does Not Play a Major Role in Brassinosteroid Signaling or Innate Immunity. Front Plant Sci. 2017 Aug 2;8:1273. doi: 10.3389/fpls.2017.01273.

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May 2002

Jonathan Jones Group

Peart JR, Lu R, Sadanandom A, Malcuit I, Moffett P, Brice DC, Schauser L, Jaggard DA, Xiao S, Coleman MJ, Dow M, Jones JDG, Shirasu K, Baulcombe DC. (2002)

Ubiquitin ligase-associated protein SGT1 is required for host and nonhost disease resistance in plants. Proc Natl Acad Sci U S A. ;99:10865-9.

January 2017

Ksenia Krasileva Group

Krasileva KV, Vasquez-Gross HA, Howell T, Bailey P, Paraiso F, Clissold L, Simmonds J, Ramirez-Gonzalez RH, Wang X, Borrill P, Fosker C, Ayling S, Phillips AL, Uauy C, Dubcovsky J (2017)

Uncovering hidden variation in polyploid wheat. Proc Natl Acad Sci U S A. 2017 Jan 17. pii: 201619268. doi: 10.1073/pnas.1619268114.

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September 2011

Sophien Kamoun Group

Vleeshouwers, V.G.A.A., Raffaele, R., Vossen, J., Champouret, N., Oliva, R., Segretin, M.E., Rietman, H., Cano, L.M., Lokossou, A., Kessel, G., Pel, M.A., and Kamoun, S. 2011.

Understanding and exploiting late blight resistance in the age of effectors. Annual Reviews of Phytopathology, 49:507-531.

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February 2014

Sophien Kamoun Group

Petre, B., and Kamoun, S.(2014)

Unsolved mystery – How do filamentous pathogens deliver effector proteins into plant cells? PLOS Biology, 12:e1001801.

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September 2012

Cyril Zipfel Group

Schoonbeek H, Liller C, Zipfel C and Ridout C (2012)

Use of PAMP-triggered immunity responses to improve the selection of quantitative disease resistance in cereals. 19th Eucarpia General Congress Proceedings: 131-134.

October 2014

Bioinformatics

Younsi R and MacLean D (2014)

Using 2k + 2 bubble searches to find Single Nucleotide Polymorphisms in k-mer graphs. Bioinformatics 2014 Oct 24. pii: btu706. [Epub ahead of print]

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March 2013

Bioinformatics

Rhys A Farrer, Daniel A Henk, Dan MacLean, David J Studholme, and Matthew C Fisher. (2013)

Using false discovery rates to benchmark snp-callers in next-generation sequencing projects. Scientific Reports, 3