Publications

May 2013

Sophien Kamoun Group

Yoshida, K., Schuenemann, V., Cano, L., Pais, M., Mishra, B., Sharma, R., Lanz, C., Martin, F., Kamoun, S., Krause, J., Thines, M., Weigel, D., and Burbano, H. 2013.

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine. eLife, 2:e00731.

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May 2013

Proteomics

Liebrand, T.W.H. van den Berg, G.C.M., Zhang, Z., Smit, P., Cordewener, J.H.G., America, A.H.P., Sklenar, J., Jones, A.M.E., Tameling, W.I.L., Robatzek, S., Thomma, B.P.H.J. and Joosten, M.H.A.J. (2013)

The receptor-like kinase SOBIR1/EVR interacts with receptor-like proteins in plant immunity against fungal infection. Proc. Natl. Acad. Sci. USA. 110: 10010-10015.

May 2013

Faulkner C., Petuschnig, E., Benitz-Alfonso, Y., Beck, M., Robatzek, S., Lipka, V. and Maule A.J. (2013)

LYM2-dependent chitin perception limits molecular flux via plasmodesmata. Proc. Natl. Acad. Sci. USA. 110: 9166-9170.

May 2013

Cyril Zipfel Group, Jonathan Jones Group

Asai S, Ichikawa T, Nomura H, Kobayashi M, Kamiyoshihara Y, Mori H, Kadota Y, Zipfel C, Jones JDG and Yoshioka H (2013)

The variable domain of a plant calcium-dependent protein kinase (CDPK) confers subcellular localization and substrate recognition for NADPH oxidase. JBC, 288(20):14332-14340.

May 2013

Sophien Kamoun Group

Takagi, H., Uemura, A., Yaegashi, H., Tamiru, M., Abe, A., Mitsuoka, C., Utsushi, H., Natsume, S., Kanzaki, H., Matsumura, H., Saitoh, H., Yoshida, K., Cano, L.M., Kamoun, S., Terauchi, R. 2013.

MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii. New Phytologist, 200:276-283.

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April 2013

Bioinformatics, Sophien Kamoun Group

Cantu, D., Segovia, V., Maclean, D., Bayles, R., Chen, X., Kamoun, S., Dubcovsky, J., Saunders, D.G., and Uauy, C. 2013.

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors. BMC Genomics, 14:270.

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April 2013

Du, Y., Tejos, R., Beck, M., Himschoot, E., Li, H., Robatzek, S., Vanneste, S., Friml, J. (2013)

Salicylic acid interferes with clathrin-mediated, Brefeldin A-sensitive endocytic protein trafficking. Proc. Natl. Acad. Sci. USA. 110:7946-7951.

April 2013

Cyril Zipfel Group

Zipfel C (2013)

Combined roles of ethylene and endogenous peptides in regulating plant immunity and growth. PNAS, 110 (15):5748-5749.

April 2013

Bioinformatics, Sophien Kamoun Group

MacLean, D., Yoshida, K., Edwards, A., Crossman, L., Clavijo, B., Clark, M., Swarbreck, D., Bashton, M., Chapman, P., Gijzen, M., Caccamo, M., Downie, A., Kamoun, S., and Saunders, D. 2013.

Crowdsourcing genomic analyses of ash and ash dieback — power to the people. GigaScience, 2:2.

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March 2013

Bioinformatics, Jonathan Jones Group

Richard M Leggett, Ricardo H Ramirez-Gonzalez, Walter Verweij, Cintia G Kawashima, Zamin Iqbal, Jonathan DG Jones, Mario Caccamo, and Daniel MacLean. (2013)

Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs. PloS ONE, 8(3):e60058