Publications

August 2009

Jonathan Jones Group

Li J, Zhao-Hui C, Batoux M, Nekrasov V, Roux M, Chinchilla D, Zipfel C, Jones JD. (2009)

Specific ER quality control components required for biogenesis of the plant innate immune receptor EFR. Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15973-8. Epub 2009 Aug 26. PubMed PMID: 19717464; PubMed Central PMCID: PMC2747228.

August 2009

Bioinformatics, Jonathan Jones Group, Sophien Kamoun Group

Haas, B.J., Kamoun, S., Zody, M.C., Jiang, R.H.Y., Handsaker, R.E., Cano, L.M., Grabherr, M., Kodira, C.D., Raffaele, S., Torto-Alalibo, T., Bozkurt, T.O., Ah-Fong, A.M.V., Alvarado, L., Anderson, V.L., Armstrong, M.R., Avrova, A., Baxter, L., Beynon, J., Boevink, P.C., Bollmann, S.R., Bos, J.I.B., Bulone, V., Cai, G., Cakir, C., Carrington, J.C., Chawner, M., Conti, L., Costanzo, S., Ewan, R., Fahlgren, N., Fischbach, M.A., Fugelstad, J., Gilroy, E.M., Gnerre, S., Green, P.J., Grenville-Briggs, L.J., Griffith, J., Grunwald, N.J., Horn, K., Horner, N.R., Hu, C.-H., Huitema, E., Jeong, D.-H., Jones, A.M.E., Jones, J.D.G., Jones, R.W., Karlsson, E.K., Kunjeti, S.G., Lamour, K., Liu, Z., Ma, L., MacLean, D., Chibucos, M.C., McDonald, H., McWalters, J., Meijer, H.J.G., Morgan, W., Morris, P.F., Munro, C.A., O'Neill, K., Ospina-Giraldo, M., Pinzon, A., Pritchard, L., Ramsahoye, B., Ren, Q., Restrepo, S., Roy, S., Sadanandom, A., Savidor, A., Schornack, S., Schwartz, D.C., Schumann, U.D., Schwessinger, B., Seyer, L., Sharpe, T., Silvar, C., Song, J., Studholme, D.J., Sykes, S., Thines, M., van de Vondervoort, P.J.I., Phuntumart, V., Wawra, S., Weide, R., Win, J., Young, C., Zhou, S., Fry, W., Meyers, B.C., van West, P., Ristaino, J., Govers, F., Birch, P.R.J., Whisson, S.C., Judelson, H.S., and Nusbaum, C. 2009.

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 461:393-398.

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July 2009

Jonathan Jones Group

Pel MA, Foster SJ, Park TH, Rietman H, van Arkel G, Jones JDG, van Eck HJ, Jacobsen E, Visser RGF, van der Vossen EAG (2009)

Mapping and cloning of late blight resistance genes from Solanum venturii using an interspecific candidate gene approach. Molecular Plant-Microbe Interactions 22:601-615.

July 2009

Jonathan Jones Group

Almeida NF, Yan S, Lindeberg M, Studholme DJ, Schneider DJ, Condon B, Liu H, Viana CJ, Warren A, Evans C, Kemen E, Maclean D, Angot A, Martin GB, Jones JD, Collmer A, Setubal JC, Vinatzer BA. (2009)

A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000. Mol Plant Microbe Interact. 2009 Jan;22(1):52-62. PubMed PMID: 19061402.

July 2009

Sophien Kamoun Group

Schornack, S., Fuchs, R., Huitema, E., Rothbauer, U., Lipka, V., and Kamoun, S. 2009.

Protein mislocalization in plant cells using a GFP-binding chromobody. Plant Journal, 60:744-754.

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July 2009

Sophien Kamoun Group

Jagdale, G.B., Kamoun, S., and Grewal, P.S. 2009.

Entomopathogenic nematodes induce components of systemic resistance in plants: Biochemical and molecular evidence. Biological Control, 51:102-109.

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June 2009

Jonathan Jones Group

Thines M, Choi YJ, Kemen E, Ploch S, Holub EB, Shin HD, Jones JD. (2009)

A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae). Persoonia. 2009 Jun;22:123-8. Epub 2009 May 26. PubMed PMID: 20198144; PubMed Central PMCID: PMC2789544.

June 2009

Sophien Kamoun Group

Yoshida, K., Saitoh, H., Fujisawa, S., Kanzaki, H., Matsumura, H., Yoshida, K., Tosa, Y., Chuma, I., Takano, Y., Win, J., Kamoun, S., and Terauchi, R. 2009.

Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae. Plant Cell, 21:1573-1591.

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May 2009

Bioinformatics

Vladimir T Valkov, Nunzia Scotti, Sabine Kahlau, Daniel MacLean, Ste- fania Grillo, John C Gray, Ralph Bock, and Teodoro Cardi. (2009)

Genome-wide analysis of plastid gene expression in potato leaf chloroplasts and tuber amyloplasts: transcriptional and posttranscriptional control. Plant Physi- ology, 150(4):2030–2044.

May 2009

Jonathan Jones Group

Hofius D, Schultz-Larsen T, Joensen J, Tsitsigiannis DI, Petersen NH, Mattsson O, Jørgensen LB, Jones JD, Mundy J, Petersen M. (2009)

Autophagic components contribute to hypersensitive cell death in Arabidopsis. Cell. 2009 May 15;137(4):773-83. PubMed PMID: 19450522.