Publications

December 2010

Bioinformatics, Sophien Kamoun Group

Raffaele, S., Farrer, R.A., Cano, L.M., Studholme, D.J., MacLean, D., Thines, M., Jiang, R.H.Y., Zody, M.C., Kunjeti, S.G., Donofrio, N.M., Meyers, B.C., Nusbaum, C., and Kamoun, S. 2010.

Genome evolution following host jumps in the Irish potato famine pathogen lineage. Science, 330:1540-1543.

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November 2010

Jonathan Jones Group, Sophien Kamoun Group

Baxter, L., Tripathy, S., Ishaque, N., Boot, N., Cabral, A., Kemen, E., Thines, M., Ah-Fong, A., Anderson, R., Badejoko, W., Bittner-Eddy, P., Boore, J.L., Chibucos, M.C., Coates, M., Dehal, P., Delehaunty, K., Dong, S., Downton, P., Dumas, B., Fabro, G., Fronick, C., Fuerstenberg, S.I., Fulton, L., Gaulin, E., Govers, F., Hughes, L., Humphray, S., Jiang, R.H.Y., Judelson, H., Kamoun, S., Kyung, K., Meijer, H., Minx, P., Morris, P., Nelson, J., Phuntumart, V., Qutob, D., Rehmany, A., Rougon-Cardoso, A., Ryden, P., Torto-Alalibo, T., Studholme, D., Wang, Y., Win, J., Wood, J., Clifton, S.W., Rogers, J., Van den Ackerveken, G., Jones, J.D.G., McDowell, J.M., Beynon, J., and Tyler, B.M. 2010.

Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science, 330:1549-1551.

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November 2010

Sophien Kamoun Group

Yaeno, T., Li, H., Chaparro-Garcia, A., Schornack, S., Koshiba, S., Watanabe, S., Kigawa, T., Kamoun, S., and Shirasu, K. 2011.

Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity. Proceedings of the National Academy of Sciences USA, 108:14682-14687.

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November 2010

Sophien Kamoun Group

Raffaele, S., Win, J., Cano, L.M., Kamoun, S. 2010.

Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans. BMC Genomics, 11:637.

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October 2010

Bioinformatics

Mathew G Lewsey, Alex M Murphy, Daniel MacLean, Neil Dalchau, Jack H Westwood, Keith Macaulay, Mark H Bennett, Michael Moulin, David E Hanke, Glen Powell, et al. (2010)

Disruption of two defensive signaling pathways by a viral rna silencing suppressor. Molecular Plant-Microbe Interactions, 23(7):835–845.

October 2010

Sophien Kamoun Group

Bos, J.I.B., Prince, D., Pitino, M., Maffei, M.E., Win, J., and Hogenhout, S.A. 2010.

A functional genomics approach identifies candidate effectors from the aphid species Myzus persicae (green peach aphid). PLoS Genetics, 6:e1001216.

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October 2010

Nick Talbot Group

Li Y, Liang S, Yan X, Wang H, Li D, Soanes DM, Talbot NJ, Wang Z, Wang Z (2010)

Characterization of MoLDB1 required for vegetative growth, infection-related morphogenesis, and pathogenicity in the rice blast fungus Magnaporthe oryzae. Mol Plant Microbe Interact. 2010 Oct;23(10):1260-74. doi: 10.1094/MPMI-03-10-0052.

October 2010

Sophien Kamoun Group

Kaschani, F., Shabab, M., Bozkurt, T., Shindo, T., Schornack, S., Gu, C., Ilyas, M., Win, J., Kamoun, S., van der Hoorn, R.A. 2010.

An effector-targeted protease contributes to defense against Phytophthora infestans and is under diversifying selection in natural hosts. Plant Physiology, 154:1794-1804.

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September 2010

Bioinformatics

Salomon, S., Grunewald, D., Stüber, K., Schaaf, S., MacLean, D., Schulze-Lefert, P. and Robatzek, S. (2010)

High throughput confocal imaging of intact live tissue enables quantification of membrane trafficking in Arabidopsis. Plant Physiol. 154: 1096-1104.

September 2010

Cyril Zipfel Group

Zipfel, C. and Robatzek, S.

PAMP-triggered immunity: veni, vidi, …? Plant Physiol. 154: 551-554. (review)