Publications

April 2008

Sophien Kamoun Group

Grant, M., and Kamoun, S. 2008.

Common threads amid diversity. Current Opinion in Plant Biology, 11:357-359.

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January 2010

Sophien Kamoun Group

Green, S., Studholme, D.J., Laue, B.E., Dorati, F., Lovell, H., Arnold, D., Cottrell, J.E., Bridgett, S., Blaxter, M., Huitema, E., Thwaites, R., Sharp, P.M., Jackson, R.W., and Kamoun, S. 2010.

Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum. PLoS ONE, 5:e10224.

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September 2015

Sophien Kamoun Group

Yoshida K, Sasaki E, Kamoun S (2015)

Computational analyses of ancient pathogen DNA from herbarium samples: challenges and prospects. Front. Plant Sci. | doi: 10.3389/fpls.2015.00771

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October 2013

Bioinformatics, Sophien Kamoun Group

Kosugi, S., Natsume, S., Yoshida, K., MacLean, D., Cano, L., Kamoun, S., and Terauchi, R. 2013.

Coval: Improving alignment quality and variant calling accuracy for next-generation sequencing data. PLOS ONE, 8:e75402.

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April 2014

Bioinformatics, Sophien Kamoun Group

Saunders, D., Yoshida, K., Sambles, C., Glover, R., Clavijo, B., Corpas, M., Bunting, D., Dong, S., Clark, M., Swarbreck, D., Ayling, S., Bashton, M., Collin, S., Hosoya, T., Edwards, A., Crossman, L., Etherington, G., Win, J., Cano, L., Studholme, D., Downie, J.A., Caccamo, M., Kamoun, S., and MacLean, D. (2014)

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community. bioRxiv, 5:98.

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April 2013

Bioinformatics, Sophien Kamoun Group

MacLean, D., Yoshida, K., Edwards, A., Crossman, L., Clavijo, B., Clark, M., Swarbreck, D., Bashton, M., Chapman, P., Gijzen, M., Caccamo, M., Downie, A., Kamoun, S., and Saunders, D. 2013.

Crowdsourcing genomic analyses of ash and ash dieback — power to the people. GigaScience, 2:2.

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March 2013

Jonathan Jones Group, Sophien Kamoun Group

Sharma, S., Sharma, S., Hirabuchi, A., Yoshida, K., Fujisaki, K., Ito, A., Uemura, A., Terauchi, R., Kamoun, S., Sohn, K.H., Jones, J.D., and Saitoh, H. 2013.

Deployment of Burkholderia glumae type III secretion system as an efficient tool for translocating pathogen effectors to monocot cells. Plant Journal, 74:701-712.

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March 2009

Sophien Kamoun Group

Bos, J..I.B., Chaparro-Garcia, A., Quesada-Ocampo, L.M., McSpadden-Gardener, B.B., and Kamoun, S. 2009.

Distinct amino acids of the Phytophthora infestans effector AVR3a condition activation of R3a hypersensitivity and suppression of cell death. Molecular Plant-Microbe Interactions, 22:269-281.

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July 2016

Sophien Kamoun Group

Hopes A, Nekrasov V, Kamoun S, Mock T (2016)

Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana. bioRxiv preprint July 18, 2016 doi: http://dx.doi.org/10.1101/062026

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November 2016

Sophien Kamoun Group

Hopes A, Nekrasov V, Kamoun S, Mock T (2016)

Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana. Plant Methods 12:49. doi: 10.1186/s13007-016-0148-0

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