Publications

January 2010

Bioinformatics

Pawel Durek, Robert Schmidt, Joshua L Heazlewood, Alexandra Jones, Daniel MacLean, Axel Nagel, Birgit Kersten, and Waltraud X Schulze. (2010)

Phosphat: the arabidopsis thaliana phosphorylation site database. an up- date. Nucleic Acids Research, 38(suppl 1):D828–D834

June 2008

Bioinformatics

Daniel MacLean, Michael A Burrell, David J Studholme, and Alexandra ME Jones. (2008)

Phoscalc: a tool for evaluating the sites of peptide phos- phorylation from mass spectrometer data. BMC Research Notes, 1(1):30, 2008.

January 2014

Bioinformatics

Dan MacLean. (2014)

Out of the woods. ash dieback and the future of emergent pathogenomics. Molecular Plant Pathology, 15(1):1–4

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June 2011

Bioinformatics

Etherington G and MacLean D (2011)

Next-Generation techniques for analysing Next-Generation sequence data (2011). GIT Laboratory Journal, 15, 11-12, pp 10-11

January 2011

Bioinformatics

John Walshaw, Graham J Etherington, and Dan MacLean (2011)

Next-generation sequencing approaches to metagenomics. page 63. Horizon Scientific Press

October 2018

Proteomics, Sophien Kamoun Group

Zess EK, Jensen C, Cruz-Mireles N, De la Concepcion JC, Sklenar J, Imre R, Roitinger E, Hughes R, Belhaj K, Mechtler K, Menke F, Bozkurt T, Banfield M, Kamoun S, Maqbool A, Dagdas Y (2018)

N-terminal β-strand underpins biochemical specialization of an ATG8 isoform. bioRxiv preprint Oct 25, 2018 doi: https://doi.org/10.1101/453563

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January 2016

Synthetic Biology

Raitskin O, Patron NJ (2015)

Multi-gene engineering in plants with RNA-guided Cas9 nuclease. Curr Opin Biotechnol. 2015 doi: 10.1016/j.copbio.2015.11.008

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February 2016

Synthetic Biology

Parry G, Patron N, Bastow R, Matthewman C (2016)

Meeting report: GARNet/OpenPlant CRISPR-Cas workshop. Plant Methods 2016 12:6 DOI: 10.1186/s13007-016-0104-z

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January 2015

Bioinformatics, Cyril Zipfel Group

Etherington GJ, Monaghan J, Zipfel C, MacLean D (2014)

Mapping mutations in plant genomes with the user-friendly web application CandiSNP. Plant Methods 2014, 10:306. doi:10.1186/s13007-014-0041-7

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September 2013

Bioinformatics, Sophien Kamoun Group

Cano, L.M., Raffaele, S., Haugen, R.H., Saunders, D.G.O., Leonelli, L., MacLean, D., Hogenhout, S.A., and Kamoun, S. 2013.

Major transcriptome reprogramming underlies floral mimicry induced by the rust fungus Puccinia monoica in Boechera stricta. PLOS ONE, 8:e75293.

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