Publications

March 2021

Duxbury Z, Wu CH, Ding P (2021)

A Comparative Overview of the Intracellular Guardians of Plants and Animals: NLRs in Innate Immunity and Beyond. Annu Rev Plant Biol. 2021 Mar 9. doi: 10.1146/annurev-arplant-080620-104948.

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May 2020

Jonathan Jones Group

Witek K, Lin X, Karki HS, Jupe F, Witek AI, Steuernagel B, Stam R, Van Oosterhout C, Fairhead S, Cocker JM, Bhanvadia S, Barrett W, Song T, Vleeshouwers VGAA, Tomlinson L, Wulff BBH, Jones JDG (2020)

A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector. bioRxiv preprint May 15, 2020 doi: https://doi.org/10.1101/2020.05.15.095497

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February 2021

Jonathan Jones Group, Sophien Kamoun Group

Witek K, Lin X, Karki HS, Jupe F, Witek AI, Steuernagel B, Stam R, van Oosterhout C, Fairhead S, Heal R, Cocker JM, Bhanvadia S, Barrett W, Wu CH, Adachi H, Song T, Kamoun S, Vleeshouwers VGAA, Tomlinson L, Wulff BBH, Jones JDG (2021)

A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector. Nat Plants. 2021 Feb 11. doi: 10.1038/s41477-021-00854-9.

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July 2017

Woolfenden HC, Bourdais G, Kopischke M, Miedes E, Molina A, Robatzek S, Morris RJ (2017)

A computational approach for inferring the cell wall properties that govern guard cell dynamics. Plant J. 2017 Jul 25. doi: 10.1111/tpj.13640.

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September 2017

Woolfenden HC, Bourdais G, Kopischke M, Miedes E, Molina A, Robatzek S, Morris RJ (2017)

A computational approach for inferring the cell wall properties that govern guard cell dynamics. Plant Journal 92, 5-18.

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January 2021

Cyril Zipfel Group

DeFalco TA, Anne P, James SR, Willoughby A, Johanndrees O, Genolet Y, Pullen AM, Zipfel C, Hardtke C, Nimchuk ZL (2021)

A conserved regulatory module regulates receptor kinase signaling in immunity and development. bioRxiv preprint Jan 20, 2021 doi: https://doi.org/10.1101/2021.01.19.427293

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May 2019

Bioinformatics

MacLean D (2019)

A convolutional neural network for predicting transcriptional regulators of genes in Arabidopsis transcriptome data reveals classification based on positive regulatory interactions. bioRxiv preprint Apr 28, 2019 doi: https://doi.org/10.1101/618926

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July 2019

Sophien Kamoun Group

Wu CH, Adachi H, Concepcion JC, Castells-Graells R, Nekrasov V, Kamoun S (2019)

A CRISPR/Cas9 mediated 53 kb deletion of the NRC4 gene cluster of tomato does not affect bacterial flagellin-triggered immunity. bioRxiv preprint Jul 10, 2019 doi: https://doi.org/10.1101/697425

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September 2009

Cyril Zipfel Group, Jonathan Jones Group

Li J, Chu ZH, Batoux M, Nekrasov V, Roux M, Chinchilla D, Zipfel C and Jones JDG (2009)

A dedicated subset of ER quality control components required for plant innate immunity. Proc. Natl. Acad. Sci. USA 106: 15973-15978.

January 2013

Fitzgibbon, J., Beck, M., Zhou, J., Faulkner, C., Robatzek, S. and Oparka, K. (2013)

A developmental framework for complex plasmodesmata formation revealed by large-scale imaging of the Arabidopsis leaf epidermis. Plant Cell. 25: 57-70.