Publications

June 2016

Synthetic Biology

Patron NJ (2016)

Blueprints for green biotech: development and application of standards for plant synthetic biology. Biochem Soc Trans. 44:702-8. doi: 10.1042/BST20160044.

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April 2016

Bioinformatics, Jonathan Jones Group, The 2Blades Group

Kawashima CG, Guimarães GA, Nogueira SR, MacLean D, Cook DR, Steuernagel B, Baek J, Bouyioukos C, Melo BD, Tristão G, de Oliveira JC, Rauscher G, Mittal S, Panichelli L, Bacot K, Johnson E, Iyer G, Tabor G, Wulff BB, Ward E, Rairdan GJ, Broglie KE, Wu G, van Esse HP, Jones JD, Brommonschenkel SH (2016)

A pigeonpea gene confers resistance to Asian soybean rust in soybean. Nature Biotechnology (2016) doi:10.1038/nbt.3554

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March 2016

Proteomics

Vit O, Man P, Kadek A, Hausner J, Sklenar J, Harant K, Novak P, Scigelova M, Woffendin G, Petrak J (2016)

Large-scale identification of membrane proteins based on analysis of trypsin-protected transmembrane segments. J Proteomics. 2016 Mar 11. pii: S1874-3919(16)30069-0. doi: 10.1016/j.jprot.2016.03.016.

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March 2016

Bioinformatics

Page M, MacLean D, Schudoma C (2016)

blastjs: a BLAST+ wrapper for Node.js. BMC Research Notes (2016) 9:130 doi: 10.1186/s13104-016-1938-1

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February 2016

Synthetic Biology

Parry G, Patron N, Bastow R, Matthewman C (2016)

Meeting report: GARNet/OpenPlant CRISPR-Cas workshop. Plant Methods 2016 12:6 DOI: 10.1186/s13007-016-0104-z

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January 2016

Proteomics, Silke Robatzek Group

Mithoe SC, Ludwig C, Pel MJC, Cucinotta M, Casartelli A, Mbengue M, Sklenar J, Derbyshire P, Robatzek S, Pieterse CMJ, Aebersold R, Menke FLH (2015)

Attenuation of pattern recognition receptor signaling is mediated by a MAP kinase kinase kinase. EMBO reports (2016). DOI 10.15252/embr.201540806

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January 2016

Synthetic Biology

Raitskin O, Patron NJ (2015)

Multi-gene engineering in plants with RNA-guided Cas9 nuclease. Curr Opin Biotechnol. 2015 doi: 10.1016/j.copbio.2015.11.008

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November 2015

Synthetic Biology

Lawrenson T, Shorinola O, Stacey N, Li C, Østergaard L, Patron N, Uauy C, Harwood W (2015)

Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease. Genome Biology 2015, 16:258 doi:10.1186/s13059-015-0826-7

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November 2015

Ksenia Krasileva Group, Proteomics, Sophien Kamoun Group

Petre B, Saunders DGO, Sklenar J, Lorrain C, Krasileva KV, Win j, Duplessis D, Kamoun S (2015)

In planta expression screens of candidate effector proteins from the wheat yellow rust fungus reveal processing bodies as a pathogen-targeted plant cell compartment. bioRxiv preprint November 19, 2015 doi: http://dx.doi.org/10.1101/032276

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November 2015

Proteomics

Gupta YK, Dagdas YF, Martinez-Rochaa A-L, Kershaw MJ, Littlejohn GR, Rydera LS, Sklenar J, Menke F, Talbot NJ (2015)

Septin-Dependent Assembly of the Exocyst Is Essential for Plant Infection by Magnaporthe oryzae. The Plant Cell doi: http:/​/​dx.​doi.​org/​10.​1105/​tpc.​15.​00552

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