Publications

January 2011

Sophien Kamoun Group

Tian, M., Win, J., Savory, E., Burkhardt, A., Held, M., Brandizzi, F., Day, B. 2011.

454 genome sequencing of Pseudoperonospora cubensis reveals effector proteins with a putative QXLR translocation motif. Molecular Plant-Microbe Interactions, 24:543-553.

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December 2010

Bioinformatics, Sophien Kamoun Group

Raffaele, S., Farrer, R.A., Cano, L.M., Studholme, D.J., MacLean, D., Thines, M., Jiang, R.H.Y., Zody, M.C., Kunjeti, S.G., Donofrio, N.M., Meyers, B.C., Nusbaum, C., and Kamoun, S. 2010.

Genome evolution following host jumps in the Irish potato famine pathogen lineage. Science, 330:1540-1543.

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November 2010

Jonathan Jones Group, Sophien Kamoun Group

Baxter, L., Tripathy, S., Ishaque, N., Boot, N., Cabral, A., Kemen, E., Thines, M., Ah-Fong, A., Anderson, R., Badejoko, W., Bittner-Eddy, P., Boore, J.L., Chibucos, M.C., Coates, M., Dehal, P., Delehaunty, K., Dong, S., Downton, P., Dumas, B., Fabro, G., Fronick, C., Fuerstenberg, S.I., Fulton, L., Gaulin, E., Govers, F., Hughes, L., Humphray, S., Jiang, R.H.Y., Judelson, H., Kamoun, S., Kyung, K., Meijer, H., Minx, P., Morris, P., Nelson, J., Phuntumart, V., Qutob, D., Rehmany, A., Rougon-Cardoso, A., Ryden, P., Torto-Alalibo, T., Studholme, D., Wang, Y., Win, J., Wood, J., Clifton, S.W., Rogers, J., Van den Ackerveken, G., Jones, J.D.G., McDowell, J.M., Beynon, J., and Tyler, B.M. 2010.

Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science, 330:1549-1551.

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November 2010

Sophien Kamoun Group

Yaeno, T., Li, H., Chaparro-Garcia, A., Schornack, S., Koshiba, S., Watanabe, S., Kigawa, T., Kamoun, S., and Shirasu, K. 2011.

Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity. Proceedings of the National Academy of Sciences USA, 108:14682-14687.

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November 2010

Sophien Kamoun Group

Raffaele, S., Win, J., Cano, L.M., Kamoun, S. 2010.

Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans. BMC Genomics, 11:637.

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October 2010

Sophien Kamoun Group

Bos, J.I.B., Prince, D., Pitino, M., Maffei, M.E., Win, J., and Hogenhout, S.A. 2010.

A functional genomics approach identifies candidate effectors from the aphid species Myzus persicae (green peach aphid). PLoS Genetics, 6:e1001216.

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October 2010

Sophien Kamoun Group

Kaschani, F., Shabab, M., Bozkurt, T., Shindo, T., Schornack, S., Gu, C., Ilyas, M., Win, J., Kamoun, S., van der Hoorn, R.A. 2010.

An effector-targeted protease contributes to defense against Phytophthora infestans and is under diversifying selection in natural hosts. Plant Physiology, 154:1794-1804.

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September 2010

Sophien Kamoun Group, Tissue Culture & Transformation

Schornack, S., van Damme, M., Bozkurt, T.O., Cano, L.M., Smoker, M., Thines, M., Gaulin, E., Kamoun S., and Huitema, E. 2010.

Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences USA, 107:17421-17426.

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August 2010

Sophien Kamoun Group

Oh, S.-K., Kamoun S., and Choi, D. 2010.

Oomycete RXLR effectors function as both activator and suppressor of plant immunity. Plant Pathology Journal, 26:209-215.

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June 2010

Sophien Kamoun Group

Levesque, C.A., Brouwer, H., Cano, L., Hamilton, J.P., Holt, C., Huitema, E., Raffaele, S., Robideau, G.P., Thines, M., Win, J., Zerillo, M.M., Beakes, G.W., Boore, J.L., Busam, D., Dumas, B., Ferriera, S., Fuerstenberg, S.I., Gachon, C.M., Gaulin, E., Govers, F., Grenville-Briggs, L., Horner, N., Hostetler, J., Jiang, R.H., Johnson, J., Krajaejun, T., Lin, H., Meijer, H.J., Moore, B., Morris, P., Phuntmart, V., Puiu, D., Shetty, J., Stajich, J.E., Tripathy, S., Wawra, S., van West, P., Whitty, B.R., Coutinho, P.M., Henrissat, B., Martin, F., Thomas, P.D., Tyler, B.M., De Vries, R.P., Kamoun, S., Yandell, M., Tisserat, N., Buell, C.R. 2010.

Genome sequence of the necrotrophic plant pathogen, Pythium ultimum, reveals original pathogenicity mechanisms and effector repertoire. Genome Biology, 11:R73.

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