Publications

January 2014

Sophien Kamoun Group

Lin, K., Limpens, E., Zhang, Z., Ivanov, S., Saunders, D.G.O., Mu, D., Pang, E., Cao, H., Cha, H., Lin, T., Zhou, Q., Shang, Y., Li, Y., Sharma, T., van Velzen, R., de Ruijter, N., Aanen, D.K., Win, J., Kamoun, S., Bisseling, T., Geurts, R., and Huang, S. (2014)

Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLOS Genetics, 10:e1004078.

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December 2013

Sophien Kamoun Group

Saunders, D.G.O. and Yoshida, K. (2013)

Harnessing the collective intelligence in response to Chalara dieback of ash. Microbiologist, 14:8-11.

October 2013

Sophien Kamoun Group

Qi, J., Liu, X., Shen, D., Miao, H., Xie, B., Li, X., Zeng, P., Wang, S., Shang, Y., Gu, X., Du, Y., Li, Y., Lin, T., Yuan, J., Yang, X., Chen, J., Chen, H., Xiong, X., Huang, K., Fei, Z., Mao, L., Tian, L., Stadler, T., Renner, S.S,, Kamoun, S., Lucas, W.J., Zhang, Z., Huang, S. 2013.

A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity. Nature Genetics, 45:1510-1515.

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October 2013

Bioinformatics, Sophien Kamoun Group

Kosugi, S., Natsume, S., Yoshida, K., MacLean, D., Cano, L., Kamoun, S., and Terauchi, R. 2013.

Coval: Improving alignment quality and variant calling accuracy for next-generation sequencing data. PLOS ONE, 8:e75402.

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October 2013

Sophien Kamoun Group

Belhaj, K., Chaparro-Garcia, A., Kamoun, S. and Nekrasov, V. (2013)

Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system. Plant Methods, 9:39.

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September 2013

Bioinformatics, Sophien Kamoun Group

Cano, L.M., Raffaele, S., Haugen, R.H., Saunders, D.G.O., Leonelli, L., MacLean, D., Hogenhout, S.A., and Kamoun, S. 2013.

Major transcriptome reprogramming underlies floral mimicry induced by the rust fungus Puccinia monoica in Boechera stricta. PLOS ONE, 8:e75293.

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August 2013

Jonathan Jones Group, Sophien Kamoun Group

Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J.D.G., and Kamoun, S. (2013)

Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nature Biotechnology, 31:691-693.

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July 2013

Jonathan Jones Group, Sophien Kamoun Group

Xia, S., Cheng, Y.T., Huang, S., Win, J., Soards, A., Jinn, T.L., Jones, J., Kamoun, S., Chen, S., Zhang, Y., Li, X. 2013.

Regulation of transcription of NB-LRR-encoding genes SNC1 and RPP4 via H3K4 tri-methylation. Plant Physiology, 162:1694-1705.

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