Publications

June 2013

Sophien Kamoun Group

Pais, M., Win, J., Yoshida, K., Etherington, G.J., Cano, L.M., Raffaele, S., Banfield, M.J., Jones, A., Kamoun, S., and Saunders, D.G.O. 2013.

From pathogen genomes to host plant processes: the power of plant parasitic oomycetes. Genome Biology, 14:211

Read more

June 2013

Sophien Kamoun Group

Banfield, M.J., and Kamoun, S. 2013.

Hooked and cooked: A fish killer genome exposed. PLOS Genetics, 9:e1003590.

Read more

May 2013

Sophien Kamoun Group

Yoshida, K., Schuenemann, V., Cano, L., Pais, M., Mishra, B., Sharma, R., Lanz, C., Martin, F., Kamoun, S., Krause, J., Thines, M., Weigel, D., and Burbano, H. 2013.

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine. eLife, 2:e00731.

Read more

May 2013

Sophien Kamoun Group

Takagi, H., Uemura, A., Yaegashi, H., Tamiru, M., Abe, A., Mitsuoka, C., Utsushi, H., Natsume, S., Kanzaki, H., Matsumura, H., Saitoh, H., Yoshida, K., Cano, L.M., Kamoun, S., Terauchi, R. 2013.

MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii. New Phytologist, 200:276-283.

Read more

April 2013

Bioinformatics, Sophien Kamoun Group

Cantu, D., Segovia, V., Maclean, D., Bayles, R., Chen, X., Kamoun, S., Dubcovsky, J., Saunders, D.G., and Uauy, C. 2013.

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors. BMC Genomics, 14:270.

Read more

April 2013

Bioinformatics, Sophien Kamoun Group

MacLean, D., Yoshida, K., Edwards, A., Crossman, L., Clavijo, B., Clark, M., Swarbreck, D., Bashton, M., Chapman, P., Gijzen, M., Caccamo, M., Downie, A., Kamoun, S., and Saunders, D. 2013.

Crowdsourcing genomic analyses of ash and ash dieback — power to the people. GigaScience, 2:2.

Read more

March 2013

Jonathan Jones Group, Sophien Kamoun Group

Sharma, S., Sharma, S., Hirabuchi, A., Yoshida, K., Fujisaki, K., Ito, A., Uemura, A., Terauchi, R., Kamoun, S., Sohn, K.H., Jones, J.D., and Saitoh, H. 2013.

Deployment of Burkholderia glumae type III secretion system as an efficient tool for translocating pathogen effectors to monocot cells. Plant Journal, 74:701-712.

Read more

January 2013

Sophien Kamoun Group

Takagi, H., Abe, A., Yoshida, K., Kosugi, S., Natsume, S., Mitsuoka, C., Uemura, A., Utsushi, H., Tamiru, M., Takuno, S., Innan, H., Cano, L.M., Kamoun, S., and Terauchi, R. 2013.

QTL-seq: Rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations. Plant Journal, 74:74-183.

December 2012

Cyril Zipfel Group, Silke Robatzek Group, Sophien Kamoun Group

Win, J., Chaparro-Garcia, A., Belhaj, K., Saunders, D.G.O., Yoshida, K., Dong, S., Schornack, S., Zipfel, C., Robatzek, S., Hogenhout, S.A., and Kamoun, S. 2012.

Effector Biology of Plant-associated Organisms: Concepts and Perspectives. Cold Spring Harbor Symposium on Quantitative Biology, 77:235-247.

Read more