Publications

March 2017

Bioinformatics, Cyril Zipfel Group

Bücherl CA, Jarsch IK, Schudoma C, Segonzac C, Mbengue M, Robatzek S, MacLean D, Ott T, Zipfel C (2017)

Plant immune and growth receptors share common signalling components but localise to distinct plasma membrane nanodomains. eLife 2017;10.7554/eLife.25114

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May 2017

Bioinformatics, Jonathan Jones Group, Proteomics

Wirthmueller L, Asai S, Rallapalli G, Sklenar J, Fabro G, Kim DS, Lintermann R, Jaspers P, Wrzaczek M, Kangasjärvi L, MacLean D, Menke FLH, Banfield MJ, JDG (2017)

An Oomycete Effector Protein Induces Shade Avoidance In Arabidopsis And Attenuates Salicylate Signaling By Binding To Host Proteins Of The RADICAL-INDUCED CELL DEATH1 Family. bioRxiv preprint May 14, 2017 doi: https://doi.org/10.1101/137844

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August 2017

Cyril Zipfel Group, Tissue Culture & Transformation

Pfeilmeier S, George J, Morel A, Roy S, Smoker M, Stransfeld L, Downie A, Peeters N, Malone J, Zipfel C (2017)

Heterologous expression of the immune receptor EFR in Medicago truncatula reduces pathogenic infection, but not rhizobial symbiosis. bioRxiv preprint Aug 2, 2017 doi: https://doi.org/10.1101/171868

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August 2017

Bioinformatics

Faulkner C, Zhou J, Evrard A, Bourdais G, MacLean D, Häweker H, Eckes P, Robatzek S (2017)

An automated quantitative image analysis tool for the identification of microtubule patterns in plants. Traffic. 2017 Jul 26. doi: 10.1111/tra.12505.

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September 2017

Proteomics, Sophien Kamoun Group

Petre B, Win J, Menke FLH, Kamoun S (2017)

Protein-Protein Interaction Assays with Effector-GFP Fusions in Nicotiana benthamiana. Methods Mol Biol. 2017;1659:85-98. doi: 10.1007/978-1-4939-7249-4_8.

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October 2017

Cyril Zipfel Group, Tissue Culture & Transformation

Boschi F, Schvartzman C, Murchio S, Ferreira V, Siri MI, Galván GA, Smoker M, Stransfeld L, Zipfel C, Vilaró FL, Dalla-Rizza M (2017)

Enhanced Bacterial Wilt Resistance in Potato Through Expression of Arabidopsis EFR and Introgression of Quantitative Resistance from Solanum commersonii. Front. Plant Sci., 25 September 2017 | https://doi.org/10.3389/fpls.2017.01642

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April 2018

Bioinformatics

McMullan M, Rafiqi M, Kaithakottil G, Clavijo BJ, Bilham L, Orton E, Percival-Alwyn L, Ward BJ, Edwards A, Saunders DGO, Garcia Accinelli G, Wright J, Verweij W, Koutsovoulos G, Yoshida K, Hosoya T, Williamson L, Jennings P, Ioos R, Husson C, Hietala AM, Vivian-Smith A, Solheim H, MacLean D, Fosker C, Hall N, Brown JKM, Swarbreck D, Blaxter M, Downie JA, Clark MD (2018)

The ash dieback invasion of Europe was founded by two genetically divergent individuals. Nat Ecol Evol. 2018 Apr 23. doi: 10.1038/s41559-018-0548-9.

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May 2018

Bioinformatics, Jonathan Jones Group, Tissue Culture & Transformation

Tomlinson L, Yang Y, Emenecker R, Smoker M, Taylor J, Perkins S, Smith J, MacLean D, Olszewski NE, Jones JDG (2018)

Using CRISPR/Cas9 genome editing in tomato to create a gibberellin-responsive dominant dwarf DELLA allele. Plant Biotechnol J. 2018 May 24. doi: 10.1111/pbi.12952.

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June 2018

Proteomics

Bi G, Zhou Z, Wang W, Li L, Rao S, Wu Y, Zhang X, Menke FLH, Chen S, Zhou J-M (2018)

Receptor-like Cytoplasmic Kinases Directly Link Diverse Pattern Recognition Receptors to the Activation of Mitogen-activated Protein Kinase Cascades in Arabidopsis. The Plant Cell Jun 2018, tpc.00981.2017; DOI: 10.1105/tpc.17.00981

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July 2018

Bioinformatics, Jonathan Jones Group

Shrestha RK, Ding P, Jones JDG, MacLean D (2018)

A workflow for simplified analysis of ATAC-cap-seq data in R. GigaScience, 2017, 1–7. DOI: 10.1093/gigascience/giy080

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