Publications

October 2018

Jonathan Jones Group

Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E, van Oosterhout C, Jones JDG (2018)

Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytol. 2018 Oct 5. doi: 10.1111/nph.15417.

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October 2018

Jonathan Jones Group

Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ, Hein I (2018)

Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytol. 2018 Oct 5. doi: 10.1111/nph.15441.

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September 2018

Jonathan Jones Group

Ma Y, Guo H, Hu L, Martinez PP, Moschou PN, Cevik V, Ding P, Duxbury Z, Sarris PF, Jones JDG (2018)

Distinct modes of derepression of an Arabidopsis immune receptor complex by two different bacterial effectors. Proc Natl Acad Sci U S A. 2018 Sep 25. pii: 201811858. doi: 10.1073/pnas.1811858115.

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September 2018

Jonathan Jones Group

Castel B, Tomlinson L, Locci F, Yang Y, Jones JDG (2018)

Optimization of T-DNA architecture for Cas9-mediated mutagenesis in Arabidopsis. bioRxiv preprint Sep 17, 2018 doi: https://doi.org/10.1101/419952

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August 2018

Bioinformatics, Jonathan Jones Group, Proteomics

Wirthmueller L, Asai S, Rallapalli G, Sklenar J, Fabro G, Kim DS, Lintermann R, Jaspers P, Wrzaczek M, Kangasjärvi J, MacLean D, Menke FLH, Banfield MJ, Jones JDG (2018)

Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1. New Phytol. 2018 Oct;220(1):232-248. doi: 10.1111/nph.15277.

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August 2018

Jonathan Jones Group

International Wheat Genome Sequencing Consortium (2018)

Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191.

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July 2018

Bioinformatics, Jonathan Jones Group

Shrestha RK, Ding P, Jones JDG, MacLean D (2018)

A workflow for simplified analysis of ATAC-cap-seq data in R. GigaScience, 2017, 1–7. DOI: 10.1093/gigascience/giy080

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June 2018

Jonathan Jones Group

Aguilera-Galvez C, Champouret N, Rietman H, Lin X, Wouters D, Chu Z, Jones JDG, Vossen JH, Visser RGF, Wolters PJ, Vleeshouwers VGAA (2018)

Two different R gene loci co-evolved with Avr2 of Phytophthora infestans and confer distinct resistance specificities in potato. Stud Mycol. 2018 Mar;89:105-115. doi: 10.1016/j.simyco.2018.01.002.

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June 2018

Jonathan Jones Group, Ksenia Krasileva Group

Steuernagel B, Witek K, Krattinger SG, Ramirez-Gonzalez RH, Schoonbeek HJ, Guotai G, Baggs E, Witek A, Yadav I, Krasileva KV, Jones JDG, Uauy C, Keller B, Ridout CJ, The International Wheat Genome Sequencing Consortium, Wulff B (2018)

Physical and transcriptional organisation of the bread wheat intracellular immune receptor repertoire. bioRxiv preprint Jun 05, 2018 doi: doi: https://doi.org/10.1101/339424

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June 2018

Jonathan Jones Group

Ding P, Guo H, Jones JDG (2018)

Deadlier than the malate. Cell Res. 2018 May 29. doi: 10.1038/s41422-018-0042-6.