Publications

March 2014

Cyril Zipfel Group, Proteomics

Macho AP, Schwessinger B, Ntoukakis V, Brutus A, Segonzac C, Roy S, Kadota Y, Oh MH, Sklenar J, Derbyshire P, Lozano-Duran R, Gro Malinovsky F, Monaghan J, Menke FL, Huber SC, He SY and Zipfel C (2014)

A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation. Science, 343 (6178): 1509-1512.

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February 2010

Bioinformatics

Daniel MacLean and David J Studholme. (2010)

A boolean model of the pseudomonas syringae hrp regulon predicts a tightly regulated system. PloS ONE, 5(2):e9101.

August 2009

Bioinformatics

David J Studholme, Selena G Ibanez, Daniel MacLean, Jeffery L Dangl, Jeff H Chang, and John P Rathjen (2009)

A draft genome sequence and functional screen reveals the repertoire of type iii secreted proteins of pseudomonas syringae pathovar tabaci 11528. BMC Genomics, 10(1):395

August 2009

Bioinformatics

Nalvo F Almeida, Shuangchun Yan, Magdalen Lindeberg, David J Studholme, David J Schneider, Bradford Condon, Haijie Liu, Carlos J Viana, Andrew Warren, Clive Evans, et al. (2009)

A draft genome sequence of pseudomonas syringae pv. tomato t1 reveals a type iii effector repertoire sig-nificantly divergent from that of pseudomonas syringae pv. tomato dc3000. Molecular Plant-Microbe Interactions, 22(1):52–62

February 2014

Synthetic Biology

Engler C, Youles M, Grützner R, Ehnert T-M, Werner S, Jones JDG, Patron NJ, Marillonnet S (2014)

A Golden Gate Modular Cloning Toolbox for Plants. ACS Synth. Biol

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April 2016

Bioinformatics, Jonathan Jones Group, The 2Blades Group

Kawashima CG, Guimarães GA, Nogueira SR, MacLean D, Cook DR, Steuernagel B, Baek J, Bouyioukos C, Melo BD, Tristão G, de Oliveira JC, Rauscher G, Mittal S, Panichelli L, Bacot K, Johnson E, Iyer G, Tabor G, Wulff BB, Ward E, Rairdan GJ, Broglie KE, Wu G, van Esse HP, Jones JD, Brommonschenkel SH (2016)

A pigeonpea gene confers resistance to Asian soybean rust in soybean. Nature Biotechnology (2016) doi:10.1038/nbt.3554

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May 2015

Jonathan Jones Group, Proteomics

Sarris PF, Duxbury Z, Huh SU, Yan Ma, Segonzac C, Sklenar J, Derbyshire P, Cevik V, Rallapalli G, Saucet SB, Wirthmueller L, Menke FLH, Sohn KH, Jones JDG

A plant immune receptor detects pathogen effectors that target WRKY transcription factors. Cell Volume 161, Issue 5, p1089–1100

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August 2010

Bioinformatics

Sylviane Comparot-Moss, Oliver Kotting, Michaela Stettler, Christoph Edner, Alexander Graf, Sean E Weise, Sebastian Streb, Wei-Ling Lue, Daniel MacLean, Sebastian Mahlow, et al. (2010)

A putative phosphatase, lsf1, is required for normal starch turnover in arabidopsis leaves. Plant Physiology, 152(2):685–697

August 2008

Bioinformatics

Simon Moxon, Frank Schwach, Tamas Dalmay, Dan MacLean, David J Studholme, and Vincent Moulton (2008)

A toolkit for analysing large-scale plant small rna datasets. Bioinformatics, 24(19):2252–2253,

August 2017

Bioinformatics, Silke Robatzek Group

Faulkner C, Zhou J, Evrard A, Bourdais G, MacLean D, Häweker H, Eckes P, Robatzek S (2017)

An automated quantitative image analysis tool for the identification of microtubule patterns in plants. Traffic. 2017 Jul 26. doi: 10.1111/tra.12505.

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